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Uses of Morpho in edu.ucsb.nceas.morpho.datapackage |
Methods in edu.ucsb.nceas.morpho.datapackage that return Morpho | |
Morpho |
DataViewer.getMorpho()
Method to get morpho |
Morpho |
DataViewContainerPanel.getFramework()
Method to get frame work |
Methods in edu.ucsb.nceas.morpho.datapackage with parameters of type Morpho | |
void |
ColumnMetadataEditPanel.setMorpho(Morpho morpho)
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static org.w3c.dom.NodeList |
PackageUtil.getPathContent(java.io.File f,
java.util.Vector paths,
Morpho morpho)
Takes in a vector of paths and searches for each of the paths until a node is found that matches the paths. |
static org.w3c.dom.NodeList |
PackageUtil.getPathContent(java.io.File f,
java.lang.String path,
Morpho morpho)
gets the content of a tag in a given xml file with the given path |
static org.w3c.dom.Document |
PackageUtil.getDoc(java.io.File file,
Morpho morpho)
parses file with the dom parser and returns a dom Document |
static java.io.File |
PackageUtil.openFile(java.lang.String name,
Morpho morpho)
opens a file on metacat or local. |
static java.io.File |
PackageUtil.openFile(java.lang.String name,
java.lang.String location,
Morpho morpho)
figures out a files location if it is not known and opens it. |
static EditorInterface |
PackageUtil.getEditor(Morpho morpho)
gets the editor context and returns it |
static java.lang.String |
PackageUtil.addTriplesToTriplesFile(TripleCollection triples,
DataPackage dataPackage,
Morpho morpho)
method to add a collection of triples to a triples file. |
static java.lang.String |
PackageUtil.addTriplesToTriplesString(TripleCollection triples,
java.lang.String dataPackageString,
Morpho morpho)
method to add a collection of triples to a triples string. |
static java.lang.String |
PackageUtil.deleteTriplesInTriplesFile(java.lang.String searchstring,
DataPackage dataPackage,
Morpho morpho)
method to delete triples with a specified string from the triples file |
static java.util.Hashtable |
PackageUtil.getConfigFileTypeAttributes(Morpho morpho,
java.lang.String hashby)
gets the file types from the config file and hashes them by a specified attribute |
static void |
PackageUtil.save(java.lang.String filename,
org.w3c.dom.Document doc,
java.lang.String doctype,
Morpho morpho)
Save the DOM doc as a file |
static void |
PackageUtil.saveDOM(java.lang.String fileName,
org.w3c.dom.Document doc,
java.lang.String doctype,
Morpho morpho)
This method wraps the 'print' method to send DOM back to the XML document (file) that was used to create the DOM. |
void |
DataViewContainerPanel.setFramework(Morpho cf)
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void |
DataPackagePlugin.initialize(Morpho morpho)
The plugin must store a reference to the Morpho application in order to be able to call the services available through the framework. |
void |
DataPackagePlugin.createOpenPreviousVersionDialog(java.lang.String title,
int numOfVersion,
Morpho morpho,
boolean local)
This method will create a dialog for open previouse version of a datapackage |
java.lang.String |
DataPackagePlugin.getNextId(Morpho morpho)
returns the next local id from the config file returns null if configXML was unable to increment the id number |
Constructors in edu.ucsb.nceas.morpho.datapackage with parameters of type Morpho | |
AccessionNumber.AccessionNumber(Morpho morpho)
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DataPackageGUI.DataPackageGUI(Morpho morpho,
DataPackage dp)
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DataViewer.DataViewer(Morpho morpho,
java.lang.String sTitle)
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DataViewer.DataViewer(Morpho morpho,
java.lang.String sTitle,
java.io.File dataFile)
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OpenPreviousDialog.OpenPreviousDialog(java.lang.String sTitle,
int numVersions,
Morpho morpho,
boolean local)
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NewDataFile.NewDataFile(java.awt.Frame parent,
DataPackage dp,
Morpho morpho,
java.lang.String entityId)
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CreateNewDataPackageCommand.CreateNewDataPackageCommand(Morpho morpho)
Constructor of CreateNewDataPackageCommand |
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DataPackagePlugin.DataPackagePlugin(Morpho morpho)
Construct of the puglin which will be used in datapackage itself |
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TripleCollection.TripleCollection(java.io.File triplesFile,
Morpho morpho)
parses an xml document and pulls any triples out of it. |
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DataPackage.DataPackage(java.lang.String location,
java.lang.String identifier,
java.util.Vector relations,
Morpho morpho,
boolean accessCheckFlag)
Create a new data package object with an id, location and associated relations. |
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AddMetadataWizard.AddMetadataWizard(Morpho morpho,
MorphoFrame packageFrame)
Construct a dialog and set the framework |
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AddMetadataWizard.AddMetadataWizard(Morpho morpho,
boolean modal,
DataPackage dataPackage,
MorphoFrame packageFrame,
java.lang.String showImport)
Construct the dialog |
Uses of Morpho in edu.ucsb.nceas.morpho.datapackage.wizard |
Constructors in edu.ucsb.nceas.morpho.datapackage.wizard with parameters of type Morpho | |
PackageWizardShell.PackageWizardShell(Morpho morpho)
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PackageWizardShell.PackageWizardShell(Morpho morpho,
int startingFrame,
AddMetadataWizard amdw)
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Uses of Morpho in edu.ucsb.nceas.morpho.datastore |
Constructors in edu.ucsb.nceas.morpho.datastore with parameters of type Morpho | |
DataStore.DataStore(Morpho morpho)
create a new FileSystemDataStore for a Morpho |
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FileSystemDataStore.FileSystemDataStore(Morpho morpho)
create a new FileSystemDataStore for a Morpho |
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MetacatDataStore.MetacatDataStore(Morpho morpho)
Constructor to create this object in conjunction with a ceartain morpho. |
Uses of Morpho in edu.ucsb.nceas.morpho.editor |
Methods in edu.ucsb.nceas.morpho.editor with parameters of type Morpho | |
void |
EditorPlugin.initialize(Morpho morpho)
The plugin must store a reference to Morpho in order to be able to call the services available through the framework. |
void |
DocFrame.initDoc(Morpho finalMorpho,
java.lang.String doctext,
boolean flag)
Description of the Method |
Constructors in edu.ucsb.nceas.morpho.editor with parameters of type Morpho | |
DocFrame.DocFrame(Morpho morpho,
java.lang.String sTitle,
java.lang.String doctext,
boolean flag)
This constructor actual handles the creation of a tree and panel for displaying and editing the information is an XML document, as represented in the String 'doctext' |
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DocFrame.DocFrame(Morpho morpho,
java.lang.String sTitle,
java.lang.String doctext,
java.lang.String id,
java.lang.String location)
this version of the constructor is needed so that each DocFrame can 'remember' the id and location parameters used to create it |
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DocFrame.DocFrame(Morpho morpho,
java.lang.String sTitle,
java.lang.String doctext,
java.lang.String id,
java.lang.String location,
boolean templFlag)
this version of the constructor is needed so that each DocFrame can 'remember' the id and location parameters used to create it; includes template flag |
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DocFrame.DocFrame(Morpho morpho,
java.lang.String sTitle,
java.lang.String doctext,
java.lang.String id,
java.lang.String location,
java.lang.String nodeName,
java.lang.String nodeValue)
this version allows one to create a new DocFrame and set the initially selected nodename/nodetext |
Uses of Morpho in edu.ucsb.nceas.morpho.framework |
Methods in edu.ucsb.nceas.morpho.framework that return Morpho | |
static Morpho |
UIController.getMorpho()
get Morpho |
Methods in edu.ucsb.nceas.morpho.framework with parameters of type Morpho | |
static UIController |
UIController.initialize(Morpho morpho)
Initialize the single instance of the UIController, creating it if needed. |
void |
QueryRefreshInterface.updateSavedQueryMenuItems(Morpho newMorpho)
This mehod will be called when Morpho switch to another profile. |
void |
DataPackageInterface.createOpenPreviousVersionDialog(java.lang.String title,
int numOfVersion,
Morpho morpho,
boolean local)
This method will create a dialog for open previouse version of a datapackage |
java.lang.String |
DataPackageInterface.getNextId(Morpho morpho)
returns the next local id from the config file returns null if configXML was unable to increment the id number |
Constructors in edu.ucsb.nceas.morpho.framework with parameters of type Morpho | |
MorphoPrefsDialog.MorphoPrefsDialog(java.awt.Frame parentFrame,
Morpho morpho)
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InitialScreen.InitialScreen(Morpho morpho,
MorphoFrame parentFrame)
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ConnectionFrame.ConnectionFrame(Morpho cont)
Construct a frame and set the framework |
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ConnectionFrame.ConnectionFrame(Morpho cont,
boolean modal)
Construct the frame |
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ProfileDialog.ProfileDialog(Morpho cont)
Construct a dialog and set the framework |
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ProfileDialog.ProfileDialog(Morpho cont,
boolean modal)
Construct the dialog |
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LoginCommand.LoginCommand(Morpho morpho,
LoginClientInterface loginClient)
Constructor |
Uses of Morpho in edu.ucsb.nceas.morpho.plugins |
Methods in edu.ucsb.nceas.morpho.plugins with parameters of type Morpho | |
void |
PluginInterface.initialize(Morpho morpho)
This method is called after the Plugin has been created in order to allow the plugin a chance to initialize variables, create menus and toolbars, and store a reference to the framework. |
Uses of Morpho in edu.ucsb.nceas.morpho.plugins.metadisplay |
Methods in edu.ucsb.nceas.morpho.plugins.metadisplay with parameters of type Morpho | |
void |
MetaDisplayPlugin.initialize(Morpho morpho)
Required by PluginInterface; called automatically at runtime |
Uses of Morpho in edu.ucsb.nceas.morpho.plugins.xsltresolver |
Methods in edu.ucsb.nceas.morpho.plugins.xsltresolver with parameters of type Morpho | |
void |
XSLTResolverPlugin.initialize(Morpho morpho)
Required by PluginInterface; called automatically at runtime |
Uses of Morpho in edu.ucsb.nceas.morpho.query |
Methods in edu.ucsb.nceas.morpho.query that return Morpho | |
Morpho |
ResultSet.getFramework()
Get a reference to the Morpho application framework |
Methods in edu.ucsb.nceas.morpho.query with parameters of type Morpho | |
static void |
SaveQueryCommand.loadSavedQueries(Morpho myMorpho)
Load the saved queries into the Search menu so that the user can launch any queries they saved from previosu sessions. |
void |
QueryPlugin.initialize(Morpho morpho)
The plugin must store a reference to the Morpho in order to be able to call the services available through the framework. |
void |
QueryPlugin.updateSavedQueryMenuItems(Morpho newMorpho)
This method implements from QueryRefreshInterface. |
Constructors in edu.ucsb.nceas.morpho.query with parameters of type Morpho | |
ReviseSearchCommand.ReviseSearchCommand(Morpho morpho)
Constructor of SearcCommand |
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Query.Query(java.io.Reader queryspec,
Morpho morpho)
construct an instance of the Query class from an XML Stream |
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Query.Query(java.lang.String queryspec,
Morpho morpho)
construct an instance of the Query class from an XML String |
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Query.Query(Morpho morpho)
construct an instance of the Query class, manually setting the Query constraints rather that readin from an XML stream |
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LocalQuery.LocalQuery(Query query,
Morpho morpho)
Basic Constuctor for the class |
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SaveQueryCommand.SaveQueryCommand(Morpho morpho)
Constructor of SearcCommand |
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QueryDialog.QueryDialog(java.awt.Frame parent,
Morpho morpho)
Construct a new instance of the query dialog |
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OpenPreviousVersionCommand.OpenPreviousVersionCommand(OpenDialogBox box,
Morpho myMorpho)
Constructor of OpenPreviousVersionCommand |
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OpenDialogBoxCommand.OpenDialogBoxCommand(Morpho morpho)
Constructor of SearchCommand |
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ResultSet.ResultSet(Query query,
java.lang.String source,
java.util.Vector vec,
Morpho morpho)
Construct a ResultSet instance from a vector of vectors; for use with LocalQuery |
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ResultSet.ResultSet(Query query,
java.lang.String source,
java.io.InputStream resultsXMLStream,
Morpho morpho)
Construct a ResultSet instance given a query object and a InputStream that represents an XML encoding of the results. |
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HeadResultSet.HeadResultSet(Query query,
java.lang.String source,
java.io.InputStream resultsXMLStream,
Morpho morpho)
Construct a HeadResultSet instance given a query object and a InputStream that represents an XML encoding of the results. |
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HeadResultSet.HeadResultSet(Query query,
java.lang.String source,
java.util.Vector vec,
Morpho morpho)
Construct a HeadResultSet instance from a vector of vectors; for use with LocalQuery |
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SearchCommand.SearchCommand(OpenDialogBox myDialogBox,
Morpho morpho)
Constructor of SearcCommand |
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OpenDialogBox.OpenDialogBox(MorphoFrame parent,
Morpho morpho,
Query myQuery)
Construct a new instance of the query dialog |
Uses of Morpho in edu.ucsb.nceas.morpho.util |
Constructors in edu.ucsb.nceas.morpho.util with parameters of type Morpho | |
DBValidate.DBValidate(java.lang.String parserName,
Morpho morpho)
Construct a new validation object using an OASIS catalog file |
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