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Uses of Morpho in edu.ucsb.nceas.morpho |
Fields in edu.ucsb.nceas.morpho declared as Morpho | |
static Morpho |
Morpho.thisStaticInstance
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Uses of Morpho in edu.ucsb.nceas.morpho.datapackage |
Methods in edu.ucsb.nceas.morpho.datapackage that return Morpho | |
Morpho |
DataViewer.getMorpho()
Method to get morpho |
Morpho |
DataViewContainerPanel.getFramework()
Method to get frame work |
Methods in edu.ucsb.nceas.morpho.datapackage with parameters of type Morpho | |
static org.w3c.dom.NodeList |
PackageUtil.getPathContent(java.io.File f,
java.util.Vector paths,
Morpho morpho)
Takes in a vector of paths and searches for each of the paths until a node is found that matches the paths. |
static org.w3c.dom.NodeList |
PackageUtil.getPathContent(java.io.File f,
java.lang.String path,
Morpho morpho)
gets the content of a tag in a given xml file with the given path |
static org.w3c.dom.Document |
PackageUtil.getDoc(java.io.File file,
Morpho morpho)
parses file with the dom parser and returns a dom Document |
static java.io.File |
PackageUtil.openFile(java.lang.String name,
Morpho morpho)
opens a file on metacat or local. |
static java.io.File |
PackageUtil.openFile(java.lang.String name,
java.lang.String location,
Morpho morpho)
figures out a files location if it is not known and opens it. |
static EditorInterface |
PackageUtil.getEditor(Morpho morpho)
gets the editor context and returns it |
static java.lang.String |
PackageUtil.addTriplesToTriplesFile(TripleCollection triples,
DataPackage dataPackage,
Morpho morpho)
method to add a collection of triples to a triples file. |
static java.lang.String |
PackageUtil.addTriplesToTriplesString(TripleCollection triples,
java.lang.String dataPackageString,
Morpho morpho)
method to add a collection of triples to a triples string. |
static java.lang.String |
PackageUtil.deleteTriplesInTriplesFile(java.lang.String searchstring,
DataPackage dataPackage,
Morpho morpho)
method to delete triples with a specified string from the triples file |
static java.util.Hashtable |
PackageUtil.getConfigFileTypeAttributes(Morpho morpho,
java.lang.String hashby)
gets the file types from the config file and hashes them by a specified attribute |
static void |
PackageUtil.save(java.lang.String filename,
org.w3c.dom.Document doc,
java.lang.String doctype,
Morpho morpho)
Save the DOM doc as a file |
static void |
PackageUtil.saveDOM(java.lang.String fileName,
org.w3c.dom.Document doc,
java.lang.String doctype,
Morpho morpho)
This method wraps the 'print' method to send DOM back to the XML document (file) that was used to create the DOM. |
void |
EML2Beta6DataPackage.load(java.lang.String location,
java.lang.String identifier,
Morpho morpho)
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void |
EML200DataPackage.load(java.lang.String location,
java.lang.String identifier,
Morpho morpho)
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void |
DataViewContainerPanel.setFramework(Morpho cf)
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void |
DataPackagePlugin.initialize(Morpho morpho)
The plugin must store a reference to the Morpho application in order to be able to call the services available through the framework. |
void |
DataPackagePlugin.createOpenPreviousVersionDialog(java.lang.String title,
int numOfVersion,
Morpho morpho,
boolean local)
This method will create a dialog for open previouse version of a datapackage |
java.lang.String |
DataPackagePlugin.getNextId(Morpho morpho)
returns the next local id from the config file returns null if configXML was unable to increment the id number |
abstract void |
AbstractDataPackage.load(java.lang.String location,
java.lang.String identifier,
Morpho morpho)
This abstract method loads a datapackage from metacat or the local file system based on an identifier. |
protected java.io.File |
AbstractDataPackage.getFileWithID(java.lang.String ID,
Morpho morpho)
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Constructors in edu.ucsb.nceas.morpho.datapackage with parameters of type Morpho | |
TripleCollection(java.io.File triplesFile,
Morpho morpho)
parses an xml document and pulls any triples out of it. |
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OpenPreviousDialog(java.lang.String sTitle,
int numVersions,
Morpho morpho,
boolean local)
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NewDataFile(java.awt.Frame parent,
DataPackage dp,
Morpho morpho,
java.lang.String entityId)
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DataViewer(Morpho morpho,
java.lang.String sTitle)
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DataViewer(Morpho morpho,
java.lang.String sTitle,
java.io.File dataFile)
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DataPackagePlugin(Morpho morpho)
Construct of the puglin which will be used in datapackage itself |
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DataPackage(java.lang.String location,
java.lang.String identifier,
java.util.Vector relations,
Morpho morpho,
boolean accessCheckFlag)
Create a new data package object with an id, location and associated relations. |
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CreateNewDataPackageCommand(Morpho morpho)
Constructor of CreateNewDataPackageCommand |
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AccessionNumber(Morpho morpho)
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Uses of Morpho in edu.ucsb.nceas.morpho.datastore |
Constructors in edu.ucsb.nceas.morpho.datastore with parameters of type Morpho | |
MetacatDataStore(Morpho morpho)
Constructor to create this object in conjunction with a ceartain morpho. |
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FileSystemDataStore(Morpho morpho)
create a new FileSystemDataStore for a Morpho |
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DataStore(Morpho morpho)
create a new FileSystemDataStore for a Morpho |
Uses of Morpho in edu.ucsb.nceas.morpho.editor |
Methods in edu.ucsb.nceas.morpho.editor with parameters of type Morpho | |
void |
EditorPlugin.initialize(Morpho morpho)
The plugin must store a reference to Morpho in order to be able to call the services available through the framework. |
void |
DocFrame.initDoc(Morpho finalMorpho,
java.lang.String doctext)
The initialization routine for DocFrame; this method creates a secondary thread where the input XML string is parsed and turned into an editable document. |
void |
DocFrame.initDoc(Morpho morpho,
org.w3c.dom.Node docnode,
java.lang.String id,
java.lang.String loc)
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void |
DocFrame.initDoc(Morpho morpho,
org.w3c.dom.Document doc,
java.lang.String id,
java.lang.String loc,
java.lang.String initNodeName,
int initNodeNumber)
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Constructors in edu.ucsb.nceas.morpho.editor with parameters of type Morpho | |
DocFrame(Morpho morpho,
java.lang.String sTitle,
java.lang.String doctext,
boolean flag)
This constructor actual handles the creation of a tree and panel for displaying and editing the information is an XML document, as represented in the String 'doctext' |
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DocFrame(Morpho morpho,
java.lang.String sTitle,
java.lang.String doctext,
java.lang.String id,
java.lang.String location)
this version of the constructor is needed so that each DocFrame can 'remember' the id and location parameters used to create it |
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DocFrame(Morpho morpho,
java.lang.String sTitle,
java.lang.String doctext,
java.lang.String id,
java.lang.String location,
boolean templFlag)
this version of the constructor is needed so that each DocFrame can 'remember' the id and location parameters used to create it; includes template flag |
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DocFrame(Morpho morpho,
java.lang.String sTitle,
java.lang.String doctext,
java.lang.String id,
java.lang.String location,
java.lang.String nodeName,
java.lang.String nodeValue)
this version allows one to create a new DocFrame and set the initially selected nodename/nodetext |
Uses of Morpho in edu.ucsb.nceas.morpho.framework |
Methods in edu.ucsb.nceas.morpho.framework that return Morpho | |
static Morpho |
UIController.getMorpho()
get Morpho |
Methods in edu.ucsb.nceas.morpho.framework with parameters of type Morpho | |
static UIController |
UIController.initialize(Morpho morpho)
Initialize the single instance of the UIController, creating it if needed. |
void |
QueryRefreshInterface.updateSavedQueryMenuItems(Morpho newMorpho)
This mehod will be called when Morpho switch to another profile. |
void |
DataPackageInterface.createOpenPreviousVersionDialog(java.lang.String title,
int numOfVersion,
Morpho morpho,
boolean local)
This method will create a dialog for open previouse version of a datapackage |
java.lang.String |
DataPackageInterface.getNextId(Morpho morpho)
returns the next local id from the config file returns null if configXML was unable to increment the id number |
Constructors in edu.ucsb.nceas.morpho.framework with parameters of type Morpho | |
ProfileDialog(Morpho cont)
Construct a dialog and set the framework |
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ProfileDialog(Morpho cont,
boolean modal)
Construct the dialog |
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MorphoPrefsDialog(java.awt.Frame parentFrame,
Morpho morpho)
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LoginCommand(Morpho morpho,
LoginClientInterface loginClient)
Constructor |
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InitialScreen(Morpho morpho,
MorphoFrame parentFrame)
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ConnectionFrame(Morpho cont)
Construct a frame and set the framework |
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ConnectionFrame(Morpho cont,
boolean modal)
Construct the frame |
Uses of Morpho in edu.ucsb.nceas.morpho.plugins |
Methods in edu.ucsb.nceas.morpho.plugins with parameters of type Morpho | |
void |
PluginInterface.initialize(Morpho morpho)
This method is called after the Plugin has been created in order to allow the plugin a chance to initialize variables, create menus and toolbars, and store a reference to the framework. |
Uses of Morpho in edu.ucsb.nceas.morpho.plugins.datapackagewizard |
Methods in edu.ucsb.nceas.morpho.plugins.datapackagewizard with parameters of type Morpho | |
void |
DataPackageWizardPlugin.initialize(Morpho morpho)
Required by PluginInterface; called automatically at runtime |
Uses of Morpho in edu.ucsb.nceas.morpho.plugins.datapackagewizard.pages |
Methods in edu.ucsb.nceas.morpho.plugins.datapackagewizard.pages with parameters of type Morpho | |
static java.io.File |
CodeDefnPanel.getEntityFile(Morpho morpho,
AbstractDataPackage adp,
int entityIndex)
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Uses of Morpho in edu.ucsb.nceas.morpho.plugins.metadisplay |
Methods in edu.ucsb.nceas.morpho.plugins.metadisplay with parameters of type Morpho | |
void |
MetaDisplayPlugin.initialize(Morpho morpho)
Required by PluginInterface; called automatically at runtime |
Uses of Morpho in edu.ucsb.nceas.morpho.plugins.printer |
Methods in edu.ucsb.nceas.morpho.plugins.printer with parameters of type Morpho | |
void |
PrinterPlugin.initialize(Morpho morpho)
Required by PluginInterface; called automatically at runtime |
Constructors in edu.ucsb.nceas.morpho.plugins.printer with parameters of type Morpho | |
PrintCommand(Morpho morpho,
PrinterPlugin prPlugin)
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PreviewCommand(Morpho morpho,
PrinterPlugin prPlugin)
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Uses of Morpho in edu.ucsb.nceas.morpho.plugins.xsltresolver |
Methods in edu.ucsb.nceas.morpho.plugins.xsltresolver with parameters of type Morpho | |
void |
XSLTResolverPlugin.initialize(Morpho morpho)
Required by PluginInterface; called automatically at runtime |
Uses of Morpho in edu.ucsb.nceas.morpho.query |
Methods in edu.ucsb.nceas.morpho.query that return Morpho | |
Morpho |
ResultSet.getMorpho()
Get the morpho attribute |
Morpho |
ResultSet.getFramework()
Get a reference to the Morpho application framework |
Morpho |
Query.getMorpho()
get the morpho from query |
Methods in edu.ucsb.nceas.morpho.query with parameters of type Morpho | |
static void |
SaveQueryCommand.loadSavedQueries(Morpho myMorpho)
Load the saved queries into the Search menu so that the user can launch any queries they saved from previosu sessions. |
void |
QueryPlugin.initialize(Morpho morpho)
The plugin must store a reference to the Morpho in order to be able to call the services available through the framework. |
void |
QueryPlugin.updateSavedQueryMenuItems(Morpho newMorpho)
This method implements from QueryRefreshInterface. |
Constructors in edu.ucsb.nceas.morpho.query with parameters of type Morpho | |
SearchCommand(OpenDialogBox myDialogBox,
Morpho morpho)
Constructor of SearcCommand |
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SaveQueryCommand(Morpho morpho)
Constructor of SearcCommand |
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ReviseSearchCommand(Morpho morpho)
Constructor of SearcCommand |
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ResultsetHandler(java.io.InputStream resultsXMLStream,
SynchronizeVector resultsVector,
Morpho morpho,
java.lang.String source)
A contruct will be used in another thread |
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ResultsetHandler(Morpho morpho,
java.lang.String source)
A constructor to set up a ContentHanler |
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ResultSet(Query query,
java.lang.String source,
java.util.Vector vec,
Morpho morpho)
Construct a ResultSet instance from a vector of vectors; for use with LocalQuery |
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ResultSet(Query query,
java.lang.String source,
java.io.InputStream resultsXMLStream,
Morpho morpho)
Construct a ResultSet instance given a query object and a InputStream that represents an XML encoding of the results. |
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QueryDialog(java.awt.Frame parent,
Morpho morpho)
Construct a new instance of the query dialog |
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Query(java.io.Reader queryspec,
Morpho morpho)
construct an instance of the Query class from an XML Stream |
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Query(java.lang.String queryspec,
Morpho morpho)
construct an instance of the Query class from an XML String |
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Query(Morpho morpho)
construct an instance of the Query class, manually setting the Query constraints rather that readin from an XML stream |
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OpenPreviousVersionCommand(OpenDialogBox box,
Morpho myMorpho)
Constructor of OpenPreviousVersionCommand |
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OpenDialogBoxCommand(Morpho morpho)
Constructor of SearchCommand |
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OpenDialogBox(MorphoFrame parent,
Morpho morpho,
Query myQuery)
Construct a new instance of the query dialog |
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LocalQuery(Query query,
Morpho morpho)
Basic Constuctor for the class |
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HeadResultSet(Query query,
java.lang.String source,
java.io.InputStream resultsXMLStream,
Morpho morpho)
Construct a HeadResultSet instance given a query object and a InputStream that represents an XML encoding of the results. |
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HeadResultSet(Query query,
java.lang.String source,
java.util.Vector vec,
Morpho morpho)
Construct a HeadResultSet instance from a vector of vectors; for use with LocalQuery |
Uses of Morpho in edu.ucsb.nceas.morpho.util |
Constructors in edu.ucsb.nceas.morpho.util with parameters of type Morpho | |
DBValidate(java.lang.String parserName,
Morpho morpho)
Construct a new validation object using an OASIS catalog file |
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