NCEAS 12574: Cook: Forecasting phenology: Integrating ecology, climatology, and phylogeny to understand plant responses to climate change , National Center for Ecological Analysis and Synthesis , and Wolkovich E. 2012. STONE: Synthesis of Timings Observed in iNcrease Experiments Download

General

nceas.982.6

The Synthesis of Timings Observed in iNcrease Experiments (STONE) database includes data from over 37 warming experiments focused explicitly on assessing phenological change with temperature increases. Only studies that gave data on phenological shifts and the temperature change were included. These data have been used in a study comparing experimental and observational results of temperature change (Wolkovich et al.) and in a study linking performance and a species' ability to track climate (Cleland et al.). See Wolkovich et al. for extensive details on the data.

None

KeywordType
plant phenology
warming
Northern hemisphere
climate change
experiments
2012-02-22

People and Associated Parties

NCEAS 12574: Cook: Forecasting phenology: Integrating ecology, climatology, and phylogeny to understand plant responses to climate change
National Center for Ecological Analysis and Synthesis
Elizabeth Wolkovich
Biodiversity Research Centre,
Vancouver, BC V6T 1Z4 Canada
Elizabeth Wolkovich
Biodiversity Research Centre,
Vancouver, BC V6T 1Z4 Canada
Theresa Crimmins
Custodian/Steward
Stephanie Pau
Custodian/Steward
Steven Travers
Custodian/Steward
Elizabeth Wolkovich
Principal Investigator
Jenica Allen
Custodian/Steward
Elsa Cleland
Custodian/Steward
Elizabeth Wolkovich

Geographic Region

Warming (temperature increase) experiments mainly from North America and Europe with several studies from Asia and Australia.
90.0000  degrees
90.0000  degrees
0.0000  degrees
0.0000  degrees

Temporal Coverage

1983
2009

Methods & Sampling

Meta-analysis of warming experiments

The Synthesis of Timings Observed in iNcrease Experiments (STONE) database includes data from over 37 warming experiments focused explicitly on assessing phenological change with temperature increases. To find these studies we searched the Web of Science (ISI) for Topic=(warm* OR temperature*) AND Topic=(plant* AND phenolog*) AND Topic=(experiment* OR manip*) in November 2009 and examined all 401 records, updating results through December 2010. To obtain the most accurate data we contacted authors, requesting access to their data (receiving 16.7% of data directly) then extracted phenological event dates and magnitude of warming data from the papers if authors could not share data. Studies conducted in distinctly different areas or habitats presented in one paper were each treated as individual sites. We compared all data once extracted and removed data that appeared to be duplicated (e.g., a publication would use data from 1994-1996 and another 1996-1999, if the data were identical we included the 1996 data only once), but we did not combine studies that appeared to be conducted at the same field site unless they specifically stated they were from the identical experiment. We generally extracted data for all treatments reported (e.g., several studies had additional snow or precipitation treatments) but found we had only sufficient data on temperature treatments for comparisons and analyses. We extracted all phenological data across all events (leafing, flowering and fruiting)

Data Table, Image, and Other Data Details

Study manipulation data
manipuse.csv
ecogrid://knb/wolkovich.28.1
5501 byte
Number of Header Lines1
Record Delimiter#x0A
Attribute Orientationcolumn
Simple Text
Field Delimeter,
136

Attribute Information

"DatasetID"
PLACEHOLDER
 
Unique identifier of study
 
nominal
DefinitionInitials of person who entered study and 3 digit numerical code
 
 
 
 
 
"Year"
PLACEHOLDER
 
Year
 
dateTime
FormatYYYY
Precision
 
 
 
 
 
"medium"
PLACEHOLDER
 
Medium in which climate variable was measured
 
nominal
DefinitionMedium in which climate variable was measured
 
 
 
 
 
"Temp_treat"
PLACEHOLDER
 
Temperature treatment
 
ordinal
Definition0 is control, 1 is heating, 2 is heating above 1 etc.
 
 
 
 
 
"onetempchange"
PLACEHOLDER
 
temperature change, collapsing data from multiple columns in original file
 
ratio
Unitcelsius
Typenatural
 
 
 
 
 
"Precip_treat"
PLACEHOLDER
 
Precipitation treatment
 
nominal
Definition0 is control, 1 is water addition, -1 water removal etc.
 
 
 
 
 
"precipchange"
PLACEHOLDER
 
Change in precipitation
 
nominal
DefinitionChange in precipitation
 
 
 
 
 
"precipchangetyp"
PLACEHOLDER
 
Information on change in precipitation
 
nominal
DefinitionInformation on precipitation measurement
 
 
 
 
 
Response data
Response -- phenological and performance -- data by species
respp.csv
ecogrid://knb/wolkovich.29.1
171623 byte
Number of Header Lines1
Record Delimiter#x0A
Attribute Orientationcolumn
Simple Text
Field Delimeter,
1144

Attribute Information

"DatasetID"
PLACEHOLDER
 
Unique identifier for study
 
nominal
DefinitionUnique identifier for study, matches to Study manipulation data
 
 
 
 
 
"Temp_treat"
PLACEHOLDER
 
Temperature treatment
 
nominal
DefinitionSee info in study manipulation data
 
 
 
 
 
"Precip_treat"
PLACEHOLDER
 
Precipitation treatment, if blank is 0
 
nominal
DefinitionSee info in study manipulation data
 
 
 
 
 
"Year"
PLACEHOLDER
 
Year
 
dateTime
FormatYYYY
Precision
 
 
 
 
 
"Genus"
PLACEHOLDER
 
Genus
 
nominal
DefinitionGenus
 
 
 
 
 
"Species"
PLACEHOLDER
 
Species epithet
 
nominal
DefinitionSpecies epithet
 
 
 
 
 
"responsetype"
PLACEHOLDER
 
Response type
 
nominal
Definitionphenological or performance response types (FFD, first flower date etc.)
 
 
 
 
 
"meanresponse"
PLACEHOLDER
 
mean response: for phenological and performance data
 
ratio
Unitdimensionless
Typereal
 
 
 
 
 
"responseunites"
PLACEHOLDER
 
units for meanresponse column
 
nominal
Definitionunits
 
 
 
 
 
"stderror"
PLACEHOLDER
 
standard error
 
ratio
Unitdimensionless
Typereal
 
 
 
 
 
"n"
PLACEHOLDER
 
n
 
ratio
Unitdimensionless
Typenatural
 
 
 
 
 
"otherdatanote"
PLACEHOLDER
 
notes
 
nominal
Definitionnotes
 
 
 
 
 
"Responsenotes"
PLACEHOLDER
 
more notes
 
nominal
Definitionmore notes
 
 
 
 
 
"phenper"
PLACEHOLDER
 
notes related to whether response is phenological or performance
 
nominal
Definitionnotes
 
 
 
 
 
"phentype"
PLACEHOLDER
 
type of phenological data
 
nominal
Definitiontype of phenological data, where applicable
 
 
 
 
 
"species"
PLACEHOLDER
 
latin binomial
 
nominal
Definitionlatin binomial
 
 
 
 
 
"medium"
PLACEHOLDER
 
medium
 
nominal
Definitionmedium
 
 
 
 
 
"onetempchange"
PLACEHOLDER
 
temperature change
 
ratio
Unitcelsius
Typereal
 
 
 
 
 
"precipchange"
PLACEHOLDER
 
precipitation change
 
nominal
Definitionprecipitation change
 
 
 
 
 
"precipchangetyp"
PLACEHOLDER
 
precipitation change information
 
nominal
Definitionprecipitation change
 
 
 
 
 
Temperature manipulation: Duration of measurement
maniptemps.csv
ecogrid://knb/wolkovich.30.1
2779 byte
Number of Header Lines1
Record Delimiter#x0A
Attribute Orientationcolumn
Simple Text
Field Delimeter,
173

Attribute Information

Variables
"site"
"temprep"
"site"
PLACEHOLDER
 
Unique identifier of study
 
nominal
DefinitionUnique identifier of study
 
 
 
 
 
"temprep"
PLACEHOLDER
 
temperature change (onetempchange) is study mean or growing season mean
 
nominal

Enumerated Domain

CodeDefinitionSource
"mean"mean
"growseas"growing season
NANA
 
 
 
 
 
timingstudy.csv
Data related to each study
timingstudy.csv
ecogrid://knb/wolkovich.50.1
6302 byte
Number of Header Lines1
Record Delimiter#x0A
Attribute Orientationcolumn
Simple Text
Field Delimeter,u
45

Attribute Information

DatasetID
PLACEHOLDER
 
ID for the dataset: a combination of who entered the data and a #
 
nominal
DefinitionMisc
 
 
 
 
 
site
PLACEHOLDER
 
Location of study
 
nominal
DefinitionSite location
 
 
 
 
 
Authorlastname
PLACEHOLDER
 
Last name of first author of paper with study
 
nominal
DefinitionAuthor's last name
 
 
 
 
 
Pubyear
PLACEHOLDER
 
Year of publication for paper
 
ratio
UnitnominalYear
Precision1
Typewhole
 
 
 
 
 
Publication_name
PLACEHOLDER
 
Journal in which study was found
 
nominal
Definitionjournal
 
 
 
 
 
Volume
PLACEHOLDER
 
Volume
 
ordinal
DefinitionVolume
 
 
 
 
 
Startpage
PLACEHOLDER
 
Starting page of paper
 
ordinal
DefinitionStarting page
 
 
 
 
 
warmingStudytype
PLACEHOLDER
 
design of study: how warming was applied/created
 
nominal
Definitiondesign of study
 
 
 
 
 
Studttype2
PLACEHOLDER
 
Additional factor manipulated (if applicable)
 
nominal
DefinitionAdditional factor manipulated
 
 
 
 
 
datatype
PLACEHOLDER
 
data type
 
nominal

Enumerated Domain

CodeDefinitionSource
rawraw data available (phenology in each year in each plot for one species, for example)
derivedsomething one step away from raw data available (means for each treatment, for example)
 
 
 
 
 
habitat
PLACEHOLDER
 
habitat
 
nominal
Definitionhabitat
 
 
 
 
 
Lat
PLACEHOLDER
 
latitude
 
ordinal
Definitionlatitude
 
 
 
 
 
Long
PLACEHOLDER
 
longitude
 
ordinal
Definitionlongitude
 
 
 
 
 
Elevation
PLACEHOLDER
 
elevation
 
ratio
Unitmeter
Typenatural
 
 
 
 
 
dataStartyear
PLACEHOLDER
 
year data starts
 
ratio
UnitnominalYear
Typenatural
 
 
 
 
 
dataEndyear
PLACEHOLDER
 
year data ends
 
ratio
UnitnominalYear
Typenatural
 
 
 
 
 
Expstartyear
PLACEHOLDER
 
year experiment begins
 
ratio
UnitnominalYear
Typenatural
 
 
 
 
 
obsfreq
PLACEHOLDER
 
frequency of observation (if given)
 
ordinal
Definitionfrequency (in days unless otherwise noted)
 
 
 
 
 
notes
PLACEHOLDER
 
miscellaneous notes
 
nominal
Definitionmiscellaneous notes
 
 
 
 
 

Data Set Usage Rights

Free use, but please contact Wolkovich before use.

Access Control

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PermissionPrincipal
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